Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iv subunit a | N824_15495 | Not Available | + | 1016167 - 1016604 | 16340.8 |
| aminopeptidase | N824_15500 | Not Available | - | 1016658 - 1018973 | 89214.1 |
| hupe / urej protein | N824_15505 | Not Available | - | 1018978 - 1019565 | 22071.0 |
| hypothetical protein | N824_15510 | Not Available | + | 1019636 - 1020112 | 18682.3 |
| hypothetical protein | N824_15515 | Not Available | - | 1020172 - 1021215 | 39030.8 |
| hypothetical protein | N824_15520 | Not Available | + | 1021425 - 1023518 | 77194.9 |
| hypothetical protein | N824_15525 | Not Available | + | 1023548 - 1024630 | 38830.5 |
| hypothetical protein | N824_15530 | Not Available | + | 1024703 - 1025572 | 30655.4 |
| hypothetical protein | N824_15535 | Not Available | + | 1025584 - 1026630 | 36675.5 |
| hypothetical protein | N824_15540 | Not Available | + | 1026631 - 1027413 | 28998.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.