Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_15445 | Not Available | - | 996374 - 997723 | 49947.2 |
| hypothetical protein | N824_15450 | Not Available | - | 997778 - 999121 | 48638.9 |
| dna topoisomerase iv subunit b | N824_15455 | Not Available | + | 999252 - 1001153 | 72319.9 |
| hypothetical protein | N824_15460 | Not Available | + | 1001274 - 1003394 | 80161.6 |
| ribonuclease bn | N824_15465 | Not Available | - | 1003391 - 1004428 | 37663.1 |
| hypothetical protein | N824_15470 | Not Available | - | 1004437 - 1006755 | 85118.5 |
| hypothetical protein | N824_15475 | Not Available | - | 1006721 - 1011775 | 186626.0 |
| hypothetical protein | N824_15480 | Not Available | + | 1012006 - 1012494 | 17832.6 |
| dna topoisomerase iv subunit a | N824_15485 | Not Available | + | 1012644 - 1015679 | 113521.0 |
| hypothetical protein | N824_15490 | Not Available | + | 1015816 - 1016115 | 11295.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.