Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_15395 | Not Available | - | 988931 - 989611 | 25275.9 |
| hypothetical protein | N824_15400 | Not Available | + | 989769 - 991088 | 48291.0 |
| transcriptional regulator | N824_15405 | Not Available | + | 991135 - 991551 | 15546.8 |
| hypothetical protein | N824_15410 | Not Available | - | 991611 - 992111 | 19163.1 |
| hypothetical protein | N824_15415 | Not Available | - | 992219 - 992527 | 11837.9 |
| hypothetical protein | N824_15420 | Not Available | + | 992738 - 993253 | 19889.4 |
| phosphomannose isomerase | N824_15425 | Not Available | + | 993349 - 993846 | 18887.2 |
| fatty acid desaturase | N824_15430 | Not Available | + | 994000 - 994644 | 25785.0 |
| hypothetical protein | N824_15435 | Not Available | + | 994831 - 994965 | 5151.36 |
| dead/deah box helicase | N824_15440 | Not Available | - | 994962 - 996266 | 48083.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.