Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-rhamnosidase | N824_15345 | Not Available | + | 974745 - 976499 | 64938.0 |
| hypothetical protein | N824_15350 | Not Available | + | 976622 - 977671 | 39787.7 |
| hypothetical protein | N824_15355 | Not Available | + | 977702 - 981169 | 127524.0 |
| hypothetical protein | N824_15360 | Not Available | + | 981193 - 982782 | 59260.2 |
| hypothetical protein | N824_15365 | Not Available | + | 982841 - 983788 | 34251.9 |
| hypothetical protein | N824_15370 | Not Available | + | 983821 - 985161 | 47835.9 |
| hypothetical protein | N824_15375 | Not Available | + | 985158 - 986351 | 43878.2 |
| hypothetical protein | N824_15380 | Not Available | - | 986348 - 986944 | 23782.9 |
| membrane protein | N824_15385 | Not Available | - | 987235 - 988164 | 35690.7 |
| hypothetical protein | N824_15390 | Not Available | - | 988201 - 988692 | 18709.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.