Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_15245 | Not Available | + | 935547 - 936743 | 42638.4 |
| hypothetical protein | N824_15250 | Not Available | + | 936899 - 938449 | 59507.9 |
| rnd transporter | N824_15255 | Not Available | - | 938523 - 939956 | 53398.2 |
| multidrug transporter acrb | N824_15260 | Not Available | - | 939949 - 943116 | 115713.0 |
| hemolysin d | N824_15265 | Not Available | - | 943144 - 944205 | 39681.8 |
| hypothetical protein | N824_15270 | Not Available | - | 944373 - 944777 | 15156.1 |
| hypothetical protein | N824_15275 | Not Available | - | 944901 - 945791 | 32811.4 |
| hypothetical protein | N824_15280 | Not Available | + | 945992 - 946171 | 6781.34 |
| hypothetical protein | N824_15285 | Not Available | + | 946684 - 949875 | 116556.0 |
| hypothetical protein | N824_15290 | Not Available | + | 949895 - 951553 | 62278.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.