Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_15090 | Not Available | + | 901500 - 902363 | 34174.1 |
| hypothetical protein | N824_15095 | Not Available | - | 902390 - 902629 | 8950.0 |
| hypothetical protein | N824_15100 | Not Available | - | 902817 - 902978 | 6288.76 |
| hypothetical protein | N824_15105 | Not Available | - | 902984 - 903226 | 9456.2 |
| hypothetical protein | N824_15110 | Not Available | + | 903297 - 905192 | 69461.2 |
| hypothetical protein | N824_15115 | Not Available | - | 905830 - 907032 | 46142.1 |
| hypothetical protein | N824_15120 | Not Available | + | 907108 - 907245 | 5143.26 |
| hypothetical protein | N824_15125 | Not Available | + | 907235 - 908305 | 40325.9 |
| hypothetical protein | N824_15130 | Not Available | + | 908832 - 909419 | 22931.7 |
| hypothetical protein | N824_15135 | Not Available | + | 909504 - 909968 | 17184.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.