Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_15040 | Not Available | - | 889235 - 889420 | 6885.15 |
| hypothetical protein | N824_15045 | Not Available | - | 889668 - 890765 | 42862.6 |
| hypothetical protein | N824_15050 | Not Available | - | 891539 - 892189 | 25398.2 |
| hypothetical protein | N824_15055 | Not Available | - | 892269 - 893702 | 53447.9 |
| hypothetical protein | N824_15060 | Not Available | - | 893881 - 894099 | 8287.99 |
| hypothetical protein | N824_15065 | Not Available | - | 894126 - 895097 | 36194.0 |
| hypothetical protein | N824_15070 | Not Available | - | 895113 - 896378 | 48385.9 |
| hypothetical protein | N824_15075 | Not Available | - | 896560 - 897123 | 19261.5 |
| hypothetical protein | N824_15080 | Not Available | + | 897247 - 899553 | 88018.8 |
| hypothetical protein | N824_15085 | Not Available | + | 899540 - 900886 | 51668.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.