Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-1 2-mannosidase | N824_14935 | Not Available | + | 868413 - 870674 | 85781.0 |
| hypothetical protein | N824_14940 | Not Available | + | 870646 - 872094 | 51975.4 |
| hypothetical protein | N824_14945 | Not Available | - | 872168 - 873358 | 42980.6 |
| hypothetical protein | N824_14950 | Not Available | + | 873620 - 874702 | 40508.0 |
| hypothetical protein | N824_14955 | Not Available | + | 874810 - 876285 | 49863.7 |
| hypothetical protein | N824_14965 | Not Available | + | 876330 - 876527 | 7538.01 |
| hypothetical protein | N824_14970 | Not Available | - | 876532 - 876891 | 13433.7 |
| hypothetical protein | N824_14975 | Not Available | - | 876986 - 879010 | 69279.4 |
| hypothetical protein | N824_14980 | Not Available | - | 878994 - 880091 | 41695.6 |
| hypothetical protein | N824_14985 | Not Available | - | 880091 - 880831 | 25445.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.