Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| csbd family protein | N824_14885 | Not Available | + | 852147 - 852332 | 7086.46 |
| peptidase m16 | N824_14890 | Not Available | - | 852398 - 855331 | 110151.0 |
| stationary phase survival protein sure | N824_14895 | Not Available | + | 855583 - 856362 | 28371.0 |
| stationary phase survival protein sure | N824_14900 | Not Available | + | 856355 - 856624 | 9949.49 |
| lipid-a-disaccharide synthase | N824_14905 | Not Available | + | 856621 - 857727 | 41441.6 |
| hypothetical protein | N824_14910 | Not Available | + | 858109 - 861312 | 117145.0 |
| carbohydrate-binding protein susd | N824_14915 | Not Available | + | 861334 - 862923 | 59173.2 |
| hypothetical protein | N824_14920 | Not Available | + | 863127 - 863333 | 8339.64 |
| hypothetical protein | N824_14925 | Not Available | + | 863568 - 866579 | 110656.0 |
| hypothetical protein | N824_14930 | Not Available | + | 866591 - 868243 | 61441.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.