Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_14675 | Not Available | - | 812670 - 815117 | 92256.8 |
| 2-amino-3-ketobutyrate coa ligase | N824_14680 | Not Available | + | 815260 - 816447 | 43476.4 |
| phenylalanyl-trna synthetase subunit alpha | N824_14685 | Not Available | + | 816552 - 817589 | 39055.8 |
| hypothetical protein | N824_14690 | Not Available | + | 817589 - 817999 | 14061.3 |
| tetr family transcriptional regulator | N824_14695 | Not Available | + | 817999 - 818574 | 22212.8 |
| phenylalanyl-trna synthetase subunit alpha | N824_14700 | Not Available | + | 818657 - 818767 | 4160.24 |
| rna methyltransferase | N824_14705 | Not Available | + | 818860 - 820329 | 55337.1 |
| hypothetical protein | N824_14710 | Not Available | + | 820331 - 820738 | 15404.5 |
| phosphoribosyltransferase | N824_14725 | Not Available | + | 821712 - 822221 | 18827.2 |
| glycerol acyltransferase | N824_14730 | Not Available | + | 822261 - 822881 | 24222.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.