Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xylosidase | N824_14625 | Not Available | - | 798056 - 799807 | 67141.0 |
| hypothetical protein | N824_14630 | Not Available | - | 799808 - 801160 | 51640.1 |
| glycan metabolism protein ragb | N824_14635 | Not Available | - | 801217 - 802698 | 54457.2 |
| hypothetical protein | N824_14640 | Not Available | - | 802711 - 805371 | 93453.2 |
| hypothetical protein | N824_14645 | Not Available | - | 805337 - 805729 | 13836.8 |
| transcriptional regulator | N824_14650 | Not Available | - | 805979 - 808870 | 110805.0 |
| sulfurtransferase | N824_14655 | Not Available | - | 808877 - 809824 | 34738.4 |
| aminopeptidase | N824_14660 | Not Available | + | 810145 - 811323 | 43666.4 |
| hypothetical protein | N824_14665 | Not Available | + | 811499 - 812005 | 19925.1 |
| hypothetical protein | N824_14670 | Not Available | + | 812018 - 812665 | 24993.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.