Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine synthase a | N824_14525 | Not Available | - | 776286 - 777095 | 30989.6 |
| beta-n-acetylhexosaminidase | N824_14530 | Not Available | - | 777100 - 779061 | 74143.9 |
| hypothetical protein | N824_14535 | Not Available | - | 779083 - 780495 | 51044.0 |
| aspartate-semialdehyde dehydrogenase | N824_14540 | Not Available | - | 780566 - 781558 | 36353.1 |
| hypothetical protein | N824_14545 | Not Available | - | 781741 - 782643 | 33347.9 |
| hydroxypyruvate isomerase | N824_14550 | Not Available | - | 782636 - 783517 | 32451.0 |
| major facilitator transporter | N824_14555 | Not Available | - | 783556 - 784797 | 45522.4 |
| glycosyl hydrolase | N824_14560 | Not Available | - | 784830 - 785522 | 25562.1 |
| oxidoreductase | N824_14565 | Not Available | - | 785551 - 787008 | 53579.7 |
| hypothetical protein | N824_14570 | Not Available | - | 787035 - 787508 | 15988.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.