Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_14475 | Not Available | + | 766537 - 767733 | 44392.8 |
| hypothetical protein | N824_14480 | Not Available | + | 767755 - 768723 | 35771.8 |
| membrane protein | N824_14485 | Not Available | - | 768963 - 769754 | 29683.9 |
| dihydropteroate synthase | N824_14490 | Not Available | - | 769775 - 770632 | 31464.2 |
| hypothetical protein | N824_14495 | Not Available | + | 770726 - 771268 | 20552.8 |
| doxx family protein | N824_14500 | Not Available | + | 771279 - 772430 | 43435.2 |
| abc transporter permease | N824_14505 | Not Available | + | 772433 - 773488 | 39274.3 |
| hypothetical protein | N824_14510 | Not Available | + | 773491 - 773997 | 18909.9 |
| hypothetical protein | N824_14515 | Not Available | - | 773980 - 775689 | 63358.1 |
| doxx family protein | N824_14520 | Not Available | - | 775744 - 776199 | 16699.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.