Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_14425 | Not Available | + | 749571 - 752078 | 94830.6 |
| chemotaxis protein chey | N824_14430 | Not Available | - | 752063 - 753391 | 49407.9 |
| transcriptional regulator | N824_14435 | Not Available | + | 753604 - 754110 | 19638.7 |
| rrf2 family transcriptional regulator | N824_14440 | Not Available | + | 754413 - 754850 | 16110.7 |
| peptidase s8 | N824_14445 | Not Available | + | 755047 - 756645 | 58121.2 |
| hypothetical protein | N824_14450 | Not Available | - | 756691 - 759225 | 99273.9 |
| hypothetical protein | N824_14455 | Not Available | + | 759476 - 763742 | 143516.0 |
| hypothetical protein | N824_14460 | Not Available | + | 763743 - 763964 | 8378.36 |
| hypothetical protein | N824_14465 | Not Available | + | 764021 - 764803 | 30852.6 |
| hypothetical protein | N824_14470 | Not Available | - | 764872 - 766470 | 60499.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.