Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_14375 | Not Available | - | 733017 - 735305 | 85712.1 |
| hypothetical protein | N824_14380 | Not Available | + | 735350 - 736036 | 25817.9 |
| hypothetical protein | N824_14385 | Not Available | - | 736076 - 737947 | 68901.9 |
| membrane protein | N824_14390 | Not Available | - | 738145 - 739737 | 59981.5 |
| hypothetical protein | N824_14395 | Not Available | - | 739754 - 743098 | 124201.0 |
| hypothetical protein | N824_14400 | Not Available | + | 743113 - 743250 | 4953.92 |
| hypothetical protein | N824_14405 | Not Available | - | 743343 - 744341 | 37810.8 |
| hypothetical protein | N824_14410 | Not Available | - | 744439 - 745023 | 22961.1 |
| arac family transcriptional regulator | N824_14415 | Not Available | + | 745395 - 746372 | 36693.5 |
| hypothetical protein | N824_14420 | Not Available | - | 746388 - 749363 | 108937.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.