Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_14325 | Not Available | + | 727979 - 728095 | 4384.25 |
| hypothetical protein | N824_14330 | Not Available | + | 728320 - 728874 | 20803.2 |
| hypothetical protein | N824_14335 | Not Available | - | 729001 - 729378 | 14180.2 |
| hypothetical protein | N824_14340 | Not Available | + | 729487 - 730089 | 21957.8 |
| hypothetical protein | N824_14345 | Not Available | - | 730157 - 730456 | 11125.3 |
| hypothetical protein | N824_14350 | Not Available | - | 730696 - 731076 | 14756.8 |
| hypothetical protein | N824_14355 | Not Available | - | 731069 - 731443 | 13853.4 |
| hypothetical protein | N824_14360 | Not Available | - | 731468 - 731713 | 9264.61 |
| hypothetical protein | N824_14365 | Not Available | - | 731734 - 731886 | 5424.42 |
| arac family transcriptional regulator | N824_14370 | Not Available | + | 732016 - 732993 | 36721.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.