Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein der | N824_14270 | Not Available | - | 720932 - 722233 | 49026.2 |
| gtpase era | N824_14275 | Not Available | - | 722281 - 723159 | 33408.2 |
| Trna-met | Not Available | Not Available | + | 723270 - 723345 | Not Available |
| Trna-glu | Not Available | Not Available | + | 723385 - 723459 | Not Available |
| hypothetical protein | N824_14290 | Not Available | + | 723949 - 724149 | 5597.78 |
| hypothetical protein | N824_14300 | Not Available | + | 724886 - 725386 | 19484.2 |
| hypothetical protein | N824_14305 | Not Available | - | 725454 - 726224 | 29085.9 |
| hypothetical protein | N824_14310 | Not Available | - | 726218 - 727228 | 39576.0 |
| hypothetical protein | N824_14315 | Not Available | - | 727381 - 727608 | 8650.12 |
| hypothetical protein | N824_14320 | Not Available | + | 727685 - 727939 | 9336.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.