Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur cluster binding protein | N824_14120 | Not Available | - | 687514 - 688902 | 52501.4 |
| peptidase | N824_14125 | Not Available | - | 689047 - 690645 | 58341.5 |
| ribose 5-phosphate isomerase | N824_14130 | Not Available | - | 690691 - 691131 | 15955.0 |
| preprotein translocase subunit tatc | N824_14135 | Not Available | - | 691169 - 692053 | 33208.7 |
| acetyl-coa carboxylase subunit alpha | N824_14140 | Not Available | - | 692135 - 693406 | 46837.8 |
| acetyl-coa carboxylase | N824_14145 | Not Available | - | 693620 - 694096 | 16982.5 |
| 3-oxoacyl-acp synthase | N824_14150 | Not Available | - | 694249 - 695238 | 35779.6 |
| phosphate acyltransferase | N824_14155 | Not Available | - | 695248 - 696168 | 32622.6 |
| 50s ribosomal protein l32 | N824_14160 | Not Available | - | 696288 - 696479 | 7124.49 |
| hypothetical protein | N824_14165 | Not Available | - | 696498 - 697031 | 20317.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.