Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_14065 | Not Available | - | 675886 - 676323 | 16954.0 |
| hypothetical protein | N824_14070 | Not Available | - | 676359 - 677105 | 27191.7 |
| glycine cleavage system protein h | N824_14080 | Not Available | + | 679150 - 679611 | 12494.5 |
| glycine cleavage system protein h | N824_14085 | Not Available | + | 679433 - 679942 | 15004.5 |
| atpase aaa | N824_14090 | Not Available | - | 680185 - 681375 | 45788.4 |
| iron transporter | N824_14095 | Not Available | + | 681754 - 681969 | 7778.67 |
| iron transporter feob | N824_14100 | Not Available | + | 681975 - 684089 | 77734.5 |
| hypothetical protein | N824_14105 | Not Available | + | 684139 - 684723 | 22291.9 |
| hypothetical protein | N824_14110 | Not Available | - | 684672 - 685439 | 28770.1 |
| dehydrogenase | N824_14115 | Not Available | - | 685535 - 687511 | 73436.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.