Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_12385 | Not Available | + | 6420182 - 6420397 | 8344.11 |
| hypothetical protein | N824_12390 | Not Available | - | 6420394 - 6420498 | 3974.88 |
| peptidase s41 | N824_12395 | Not Available | + | 6420517 - 6422220 | 63091.5 |
| ferredoxin | N824_12400 | Not Available | - | 6422230 - 6422559 | 11888.3 |
| ferredoxin--nadp reductase | N824_12405 | Not Available | - | 6422562 - 6423572 | 36601.2 |
| udp-2,3-diacylglucosamine hydrolase | N824_12410 | Not Available | + | 6423701 - 6424453 | 29138.9 |
| peptide chain release factor 1 | N824_12415 | Not Available | + | 6424588 - 6425661 | 40174.9 |
| Trna-asp | Not Available | Not Available | + | 6425781 - 6425854 | Not Available |
| hypothetical protein | N824_12425 | Not Available | + | 6426104 - 6427330 | 39342.8 |
| hypothetical protein | N824_12430 | Not Available | + | 6428432 - 6429196 | 30363.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.