Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_12335 | Not Available | + | 6404916 - 6406466 | 59347.4 |
| peptidase m16 | N824_12340 | Not Available | - | 6406557 - 6409424 | 106117.0 |
| hypothetical protein | N824_12345 | Not Available | - | 6409448 - 6410605 | 42733.0 |
| glucosamine-6-phosphate deaminase | N824_12350 | Not Available | - | 6410669 - 6412588 | 72352.3 |
| anhydro-n-acetylmuramic acid kinase | N824_12355 | Not Available | + | 6412922 - 6414121 | 42807.6 |
| deor family transcripitonal regulator | N824_12360 | Not Available | - | 6414118 - 6414864 | 27543.4 |
| hypothetical protein | N824_12365 | Not Available | - | 6414907 - 6415110 | 7847.45 |
| hypothetical protein | N824_12370 | Not Available | + | 6415109 - 6418159 | 110324.0 |
| hypothetical protein | N824_12375 | Not Available | + | 6418169 - 6419626 | 53257.3 |
| hypothetical protein | N824_12380 | Not Available | + | 6419638 - 6420087 | 16261.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.