Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | N824_12285 | Not Available | + | 6394892 - 6396124 | 45444.0 |
| hypothetical protein | N824_12290 | Not Available | + | 6396186 - 6396509 | 12042.2 |
| 1,4-dihydroxy-6-naphthoate synthase | N824_12295 | Not Available | - | 6396518 - 6397363 | 31781.6 |
| hypothetical protein | N824_12300 | Not Available | - | 6397398 - 6398030 | 22938.9 |
| 6-pyruvoyl tetrahydrobiopterin synthase | N824_12305 | Not Available | + | 6398115 - 6398525 | 15669.5 |
| gtp cyclohydrolase i | N824_12310 | Not Available | + | 6398537 - 6399166 | 23842.7 |
| acp s-malonyltransferase | N824_12315 | Not Available | + | 6399185 - 6400066 | 31408.0 |
| hypothetical protein | N824_12320 | Not Available | + | 6400105 - 6403824 | 142108.0 |
| hypothetical protein | N824_12325 | Not Available | - | 6403816 - 6404541 | 25509.4 |
| hypothetical protein | N824_12330 | Not Available | - | 6404483 - 6404728 | 7743.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.