Pedobacter sp. V48

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Pedobacter sp. V48 is a Gram-negative bacterium primarily found in sandy environments, specifically within sand microcosms. This microbe is part of the genus Pedobacter, which is typically characterized by its distinctive morphological and biochemical properties. Gram-negative bacteria are known for their complex cell wall structure, which contributes to their resilience in diverse habitats. The habitat of Pedobacter sp. V48 suggests a potential role in the biogeochemical processes within sandy ecosystems, where microorganisms can significantly influence nutrient cycling and organic matter decomposition. The presence of this bacterium in sand microcosms indicates its adaptability to microhabitats that may experience fluctuations in moisture and nutrient availability. Understanding the functional capabilities of Pedobacter sp. V48 within its habitat could shed light on its ecological roles, such as its involvement in the degradation of organic materials or interactions with other microbial species. The study of this bacterium may provide insights into the microbial community dynamics in sandy soils and their contributions to ecosystem health and stability. As such, Pedobacter sp. V48 serves as an intriguing subject for further research into the ecological significance of microorganisms in terrestrial environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter sp. V48
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsand; sand microcosms
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter sp. V48

Accession NumberAWRU00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5839 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
leucyl/phenylalanyl-trna--protein transferaseN824_12235Not Available+6383859 - 638449123679.5
helicase snf2N824_12240Not Available-6384488 - 6387295108403.0
hypothetical proteinN824_12245Not Available+6387579 - 638823223977.3
aldehyde dehydrogenaseN824_12250Not Available-6388299 - 638984055358.2
hypothetical proteinN824_12255Not Available-6389852 - 639032218137.9
hypothetical proteinN824_12260Not Available+6390604 - 639200755194.4
phosphosulfolactate synthaseN824_12265Not Available+6392032 - 639284730716.2
hypothetical proteinN824_12270Not Available+6392885 - 639362827818.3
gliding motility protein glddN824_12275Not Available+6393629 - 639421321602.7
metallo-beta-lactamaseN824_12280Not Available+6394233 - 639487423698.3

Displaying genes 5821 – 5830 of 5895 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites