Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| leucyl/phenylalanyl-trna--protein transferase | N824_12235 | Not Available | + | 6383859 - 6384491 | 23679.5 |
| helicase snf2 | N824_12240 | Not Available | - | 6384488 - 6387295 | 108403.0 |
| hypothetical protein | N824_12245 | Not Available | + | 6387579 - 6388232 | 23977.3 |
| aldehyde dehydrogenase | N824_12250 | Not Available | - | 6388299 - 6389840 | 55358.2 |
| hypothetical protein | N824_12255 | Not Available | - | 6389852 - 6390322 | 18137.9 |
| hypothetical protein | N824_12260 | Not Available | + | 6390604 - 6392007 | 55194.4 |
| phosphosulfolactate synthase | N824_12265 | Not Available | + | 6392032 - 6392847 | 30716.2 |
| hypothetical protein | N824_12270 | Not Available | + | 6392885 - 6393628 | 27818.3 |
| gliding motility protein gldd | N824_12275 | Not Available | + | 6393629 - 6394213 | 21602.7 |
| metallo-beta-lactamase | N824_12280 | Not Available | + | 6394233 - 6394874 | 23698.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.