Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| anthranilate synthase | N824_12185 | Not Available | + | 6375751 - 6377154 | 53271.8 |
| anthranilate synthase subunit ii | N824_12190 | Not Available | + | 6377156 - 6377746 | 21907.4 |
| indole-3-glycerol-phosphate synthase | N824_12195 | Not Available | + | 6377748 - 6378539 | 28920.8 |
| gtpase hflx | N824_12200 | Not Available | + | 6378562 - 6379752 | 45531.8 |
| ribosome-binding factor a | N824_12205 | Not Available | + | 6379784 - 6380161 | 14321.0 |
| hypothetical protein | N824_12210 | Not Available | + | 6380145 - 6380837 | 25966.9 |
| hypothetical protein | N824_12215 | Not Available | + | 6380870 - 6381520 | 24372.5 |
| hypothetical protein | N824_12220 | Not Available | - | 6381517 - 6382392 | 32001.2 |
| hypothetical protein | N824_12225 | Not Available | + | 6382447 - 6383424 | 37681.4 |
| membrane protein | N824_12230 | Not Available | - | 6383421 - 6383789 | 13482.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.