Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_12035 | Not Available | + | 6335249 - 6338554 | 126014.0 |
| hypothetical protein | N824_12040 | Not Available | + | 6338554 - 6341427 | 110069.0 |
| hypothetical protein | N824_12045 | Not Available | - | 6341428 - 6341547 | 4435.65 |
| pyruvate dehydrogenase subunit beta | N824_12050 | Not Available | + | 6341559 - 6342545 | 35935.6 |
| rna-binding protein | N824_12055 | Not Available | + | 6342649 - 6344970 | 85396.8 |
| transcriptional regulator | N824_12060 | Not Available | - | 6345090 - 6345563 | 17896.9 |
| hypothetical protein | N824_12065 | Not Available | - | 6346174 - 6349371 | 117393.0 |
| amidohydrolase | N824_12070 | Not Available | - | 6349581 - 6350888 | 47379.9 |
| amidohydrolase | N824_12075 | Not Available | - | 6350881 - 6353607 | 100404.0 |
| alpha-1,2-mannosidase | N824_12080 | Not Available | - | 6353741 - 6355915 | 81191.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.