Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_11980 | Not Available | + | 6326334 - 6327149 | 25968.7 |
| Trna-ser | Not Available | Not Available | + | 6327826 - 6327913 | Not Available |
| hypothetical protein | N824_11995 | Not Available | - | 6328156 - 6328365 | 8097.8 |
| mip family channel protein | N824_12000 | Not Available | - | 6328520 - 6329251 | 25365.4 |
| glycerol kinase | N824_12005 | Not Available | - | 6329284 - 6330774 | 54164.6 |
| hypothetical protein | N824_12010 | Not Available | + | 6331023 - 6331697 | 24464.8 |
| hypothetical protein | N824_12015 | Not Available | - | 6331832 - 6331993 | 6313.79 |
| hypothetical protein | N824_12020 | Not Available | + | 6331977 - 6332609 | 22332.8 |
| glycoside hydrolase family 3 | N824_12025 | Not Available | + | 6332864 - 6334570 | 63403.0 |
| hypothetical protein | N824_12030 | Not Available | - | 6334579 - 6335118 | 19934.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.