Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate synthase | N824_11880 | Not Available | + | 6306717 - 6307910 | 44218.6 |
| n-acetyl-gamma-glutamyl-phosphate reductase | N824_11885 | Not Available | + | 6307900 - 6308871 | 35319.2 |
| acetylornithine aminotransferase | N824_11890 | Not Available | + | 6308967 - 6310127 | 42230.9 |
| n-acetylornithine carbamoyltransferase | N824_11895 | Not Available | + | 6310124 - 6311086 | 35705.9 |
| acetylglutamate kinase | N824_11900 | Not Available | + | 6311102 - 6311890 | 28075.2 |
| pyrroline-5-carboxylate reductase | N824_11905 | Not Available | + | 6311893 - 6312711 | 28519.6 |
| acetylornithine deacetylase | N824_11910 | Not Available | + | 6312718 - 6313785 | 39354.7 |
| argininosuccinate lyase | N824_11915 | Not Available | + | 6313814 - 6315145 | 49714.0 |
| aminotransferase | N824_11920 | Not Available | + | 6315166 - 6316419 | 45932.6 |
| peptide chain release factor 3 | N824_11925 | Not Available | - | 6316423 - 6318003 | 59972.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.