Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alkylhydroperoxidase | N824_11830 | Not Available | + | 6297525 - 6297866 | 13024.6 |
| dna-3-methyladenine glycosylase | N824_11835 | Not Available | + | 6297870 - 6298430 | 21154.6 |
| hypothetical protein | N824_11840 | Not Available | - | 6298439 - 6299134 | 25095.3 |
| dna polymerase i | N824_11845 | Not Available | + | 6299251 - 6302064 | 104895.0 |
| hydrolase | N824_11850 | Not Available | - | 6302118 - 6302795 | 24838.8 |
| hypothetical protein | N824_11855 | Not Available | - | 6302795 - 6303100 | 10950.1 |
| hypothetical protein | N824_11860 | Not Available | - | 6303177 - 6303701 | 19596.4 |
| hypothetical protein | N824_11865 | Not Available | - | 6303818 - 6304339 | 16172.9 |
| fad-dependent oxidoreductase | N824_11870 | Not Available | + | 6304451 - 6305653 | 44939.2 |
| acetyltransferase | N824_11875 | Not Available | + | 6306001 - 6306705 | 26717.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.