Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysine transporter lyse | N824_11780 | Not Available | - | 6290935 - 6291570 | 23307.4 |
| pp_05688 | N824_11785 | Not Available | + | 6291671 - 6292006 | Not Available |
| cmp deaminase | N824_11790 | Not Available | + | 6292007 - 6292480 | 17252.7 |
| superoxide dismutase | N824_11795 | Not Available | + | 6292637 - 6293242 | 22302.2 |
| hypothetical protein | N824_11800 | Not Available | + | 6293330 - 6293902 | 22057.6 |
| hypothetical protein | N824_11805 | Not Available | + | 6293980 - 6294390 | 14831.9 |
| transcriptional regulator | N824_11810 | Not Available | - | 6294420 - 6295352 | 35394.5 |
| gdp-l-fucose synthase | N824_11815 | Not Available | - | 6295391 - 6296365 | 36467.1 |
| trna (guanine-n(7)-)-methyltransferase | N824_11820 | Not Available | + | 6296470 - 6297120 | 24981.9 |
| methylated-dna--protein-cysteine methyltransferase | N824_11825 | Not Available | + | 6297147 - 6297473 | 12044.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.