Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartyl-trna synthetase | N824_11730 | Not Available | - | 6281468 - 6283213 | 66349.8 |
| hypothetical protein | N824_11735 | Not Available | + | 6283327 - 6283479 | 5626.01 |
| rna polymerase subunit sigma-24 | N824_11740 | Not Available | + | 6283618 - 6284061 | 17154.4 |
| hypothetical protein | N824_11745 | Not Available | + | 6284063 - 6284590 | 20325.6 |
| hypothetical protein | N824_11750 | Not Available | + | 6284587 - 6285891 | 47005.8 |
| membrane protein | N824_11755 | Not Available | + | 6285977 - 6286768 | 29041.5 |
| hypothetical protein | N824_11760 | Not Available | + | 6286777 - 6287832 | 41036.8 |
| mfs transporter | N824_11765 | Not Available | + | 6287920 - 6289455 | 56049.9 |
| hypothetical protein | N824_11770 | Not Available | + | 6289477 - 6289716 | 8645.88 |
| pseudouridine synthase | N824_11775 | Not Available | - | 6289718 - 6290902 | 44121.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.