Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutaminyl-trna synthetase | N824_11680 | Not Available | - | 6271578 - 6273239 | 63710.3 |
| methylmalonyl-coa mutase | N824_11685 | Not Available | + | 6273319 - 6273738 | 15192.8 |
| enoyl-coa hydratase | N824_11690 | Not Available | + | 6273742 - 6274524 | 27743.6 |
| chemotaxis protein chey | N824_11695 | Not Available | + | 6274695 - 6276095 | 51967.3 |
| hypothetical protein | N824_11700 | Not Available | + | 6276163 - 6277734 | 59832.4 |
| hypothetical protein | N824_11705 | Not Available | + | 6277748 - 6279205 | 54665.2 |
| permease | N824_11710 | Not Available | + | 6279217 - 6280269 | 39077.2 |
| aspartyl-trna synthetase | N824_11715 | Not Available | + | 6280322 - 6280588 | 9301.02 |
| hypothetical protein | N824_11720 | Not Available | + | 6280612 - 6281001 | 15017.2 |
| hypothetical protein | N824_11725 | Not Available | + | 6280979 - 6281428 | 16954.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.