Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna synthetase | N824_11630 | Not Available | + | 6259417 - 6260925 | 56620.8 |
| metalloprotease | N824_11635 | Not Available | + | 6260943 - 6261827 | 32154.8 |
| histidine kinase | N824_11640 | Not Available | + | 6261969 - 6263093 | 42232.2 |
| histidine kinase | N824_11645 | Not Available | + | 6263107 - 6266694 | 133966.0 |
| hypothetical protein | N824_11650 | Not Available | + | 6266699 - 6267064 | 13127.2 |
| chemotaxis protein r | N824_11655 | Not Available | + | 6267066 - 6267887 | 31847.3 |
| chemotaxis protein cheb | N824_11660 | Not Available | + | 6267887 - 6268450 | 20461.9 |
| response regulator receiver | N824_11665 | Not Available | + | 6268476 - 6268844 | 13570.1 |
| peptidase family m49 | N824_11670 | Not Available | - | 6268894 - 6270684 | 66702.5 |
| hypothetical protein | N824_11675 | Not Available | + | 6270703 - 6271536 | 30800.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.