Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s rrna methyltransferase | N824_13915 | Not Available | - | 637183 - 638232 | 39804.7 |
| 23s rrna pseudouridine synthase f | N824_13920 | Not Available | - | 638318 - 639364 | 37933.6 |
| dna damage-inducible protein dinb | N824_13925 | Not Available | - | 639519 - 640016 | 19079.9 |
| hypothetical protein | N824_13930 | Not Available | - | 640102 - 640791 | 26753.6 |
| hypothetical protein | N824_13935 | Not Available | + | 640888 - 642066 | 43795.5 |
| 2-nitropropane dioxygenase | N824_13940 | Not Available | + | 642102 - 643061 | 33764.2 |
| acylphosphatase | N824_13945 | Not Available | + | 643077 - 643355 | 10364.3 |
| polysaccharide biosynthesis protein | N824_13950 | Not Available | + | 643356 - 644840 | 56888.0 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | N824_13955 | Not Available | + | 644837 - 645268 | 14807.7 |
| hypothetical protein | N824_13960 | Not Available | + | 645299 - 646648 | 50140.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.