Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_11530 | Not Available | + | 6243650 - 6244819 | 42468.1 |
| alkyl hydroperoxide reductase | N824_11535 | Not Available | + | 6244920 - 6245615 | 25811.5 |
| thioredoxin | N824_11540 | Not Available | + | 6245633 - 6245941 | 11441.8 |
| hypothetical protein | N824_11545 | Not Available | + | 6245941 - 6246192 | 9104.9 |
| phosphoenolpyruvate carboxylase | N824_11550 | Not Available | - | 6246243 - 6248831 | 98366.7 |
| hypothetical protein | N824_11555 | Not Available | - | 6249480 - 6250676 | 39893.6 |
| secretion protein hlyd | N824_11560 | Not Available | - | 6250679 - 6251722 | 36958.2 |
| transporter | N824_11565 | Not Available | - | 6251743 - 6253059 | 48325.0 |
| hypothetical protein | N824_11570 | Not Available | - | 6253056 - 6253679 | 21403.2 |
| hypothetical protein | N824_11575 | Not Available | + | 6253781 - 6253870 | 3276.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.