Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | N824_11480 | Not Available | + | 6234851 - 6235465 | 23207.8 |
| elongation factor p | N824_11485 | Not Available | + | 6235622 - 6236182 | 21348.5 |
| hypothetical protein | N824_11490 | Not Available | + | 6236267 - 6236845 | 22011.6 |
| hypothetical protein | N824_11495 | Not Available | - | 6236806 - 6237774 | 35755.7 |
| hypothetical protein | N824_11500 | Not Available | - | 6237774 - 6239018 | 44448.7 |
| exodeoxyribonuclease iii | N824_11505 | Not Available | - | 6239022 - 6239792 | 29846.5 |
| hypothetical protein | N824_11510 | Not Available | - | 6239814 - 6240617 | 30101.6 |
| hypothetical protein | N824_11515 | Not Available | + | 6240677 - 6241249 | 21104.1 |
| aromatic ring-cleaving dioxygenase | N824_11520 | Not Available | + | 6241394 - 6242128 | 27282.8 |
| hypothetical protein | N824_11525 | Not Available | - | 6242129 - 6243529 | 51585.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.