Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-aspartate oxidase | N824_11380 | Not Available | + | 6209568 - 6211154 | 59075.6 |
| acetyltransferase | N824_11385 | Not Available | + | 6211157 - 6211666 | 18330.3 |
| hypothetical protein | N824_11390 | Not Available | - | 6211668 - 6213296 | 61392.7 |
| trna uridine 5-carboxymethylaminomethyl modification protein | N824_11395 | Not Available | - | 6213440 - 6215302 | 69244.9 |
| abc transporter | N824_11400 | Not Available | - | 6215391 - 6217253 | 70891.8 |
| rrna maturation factor | N824_11405 | Not Available | - | 6217560 - 6217994 | 16622.9 |
| hypothetical protein | N824_11410 | Not Available | - | 6218006 - 6221323 | 126558.0 |
| hypothetical protein | N824_11415 | Not Available | + | 6221416 - 6222228 | 30722.0 |
| cold-shock protein | N824_11420 | Not Available | - | 6222295 - 6222486 | 6960.28 |
| hypothetical protein | N824_11425 | Not Available | - | 6222585 - 6223526 | 36501.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.