Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | N824_11330 | Not Available | - | 6200164 - 6200973 | 30566.9 |
| hypothetical protein | N824_11335 | Not Available | - | 6200973 - 6201179 | 7820.17 |
| hypothetical protein | N824_11340 | Not Available | - | 6201160 - 6202092 | 35760.6 |
| nifr3 family tim-barrel protein | N824_11345 | Not Available | + | 6202146 - 6203153 | 37993.0 |
| cobalt transporter | N824_11350 | Not Available | + | 6203185 - 6203571 | 14493.0 |
| membrane protein | N824_11355 | Not Available | - | 6203563 - 6204264 | 26211.1 |
| hypothetical protein | N824_11360 | Not Available | + | 6204351 - 6205490 | 41786.9 |
| dna polymerase v | N824_11365 | Not Available | + | 6205534 - 6206886 | 51472.7 |
| thiamine-monophosphate kinase | N824_11370 | Not Available | - | 6206881 - 6207921 | 38241.9 |
| quinolinate synthetase | N824_11375 | Not Available | - | 6208072 - 6209064 | 36809.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.