Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase m41 | N824_11280 | Not Available | + | 6188032 - 6190122 | 77212.9 |
| hypothetical protein | N824_11285 | Not Available | + | 6190184 - 6190828 | 24588.6 |
| 3-oxoacyl-acp synthase | N824_11290 | Not Available | + | 6190894 - 6191976 | 39691.7 |
| hypothetical protein | N824_11295 | Not Available | - | 6191986 - 6193494 | 56558.4 |
| hypothetical protein | N824_11300 | Not Available | - | 6193639 - 6194382 | 28611.2 |
| ngg1p interacting factor 3 protein, nif3 | N824_11305 | Not Available | - | 6194382 - 6195479 | 40740.9 |
| membrane protein | N824_11310 | Not Available | - | 6195602 - 6195967 | 13337.3 |
| hypothetical protein | N824_11315 | Not Available | - | 6195960 - 6196286 | 12338.7 |
| transcription-repair coupling factor | N824_11320 | Not Available | + | 6196285 - 6199707 | 129980.0 |
| hypothetical protein | N824_11325 | Not Available | + | 6199719 - 6199937 | 8395.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.