Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna (guanine-n1)-methyltransferase | N824_11230 | Not Available | - | 6180404 - 6181081 | 24994.8 |
| 16s rrna processing protein rimm | N824_11235 | Not Available | - | 6181097 - 6181624 | 20327.1 |
| 30s ribosomal protein s16 | N824_11240 | Not Available | - | 6181748 - 6182338 | 21310.0 |
| hypothetical protein | N824_11245 | Not Available | + | 6182518 - 6183018 | 19719.6 |
| hypothetical protein | N824_11250 | Not Available | + | 6183062 - 6183382 | 11033.4 |
| 6-phosphofructokinase | N824_11255 | Not Available | - | 6183422 - 6184405 | 35126.5 |
| thiol:disulfide interchange protein dsbd | N824_11260 | Not Available | - | 6184398 - 6186116 | 62737.5 |
| sugar transporter | N824_11265 | Not Available | - | 6186334 - 6186783 | 16597.1 |
| hypothetical protein | N824_11270 | Not Available | - | 6186797 - 6187585 | 29790.8 |
| iojap family protein | N824_11275 | Not Available | + | 6187627 - 6188001 | 14153.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.