Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mrp | N824_11180 | Not Available | - | 6171406 - 6172518 | 39604.1 |
| penicillin-binding protein | N824_11185 | Not Available | + | 6172644 - 6174821 | 82110.5 |
| hypoxanthine phosphoribosyltransferase | N824_11190 | Not Available | + | 6174855 - 6175412 | 20678.9 |
| phosphatidylserine decarboxylase | N824_11195 | Not Available | + | 6175459 - 6176118 | 25023.4 |
| mechanosensitive ion channel protein mscs | N824_11200 | Not Available | - | 6176115 - 6177239 | 42483.4 |
| amino acid dehydrogenase | N824_11205 | Not Available | - | 6177243 - 6178505 | 46262.7 |
| 50s ribosomal protein l19 | N824_11210 | Not Available | - | 6178719 - 6179066 | 13078.9 |
| hypothetical protein | N824_11215 | Not Available | - | 6179071 - 6179166 | 3708.85 |
| hypothetical protein | N824_11220 | Not Available | - | 6179269 - 6179562 | 11380.9 |
| hypothetical protein | N824_11225 | Not Available | + | 6180048 - 6180401 | 13282.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.