Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase | N824_11130 | Not Available | - | 6162334 - 6162903 | 21987.4 |
| hypothetical protein | N824_11135 | Not Available | - | 6163020 - 6163724 | 25538.7 |
| heat shock protein hsp90 | N824_11140 | Not Available | - | 6163904 - 6165793 | 70995.6 |
| hypothetical protein | N824_11145 | Not Available | + | 6165934 - 6166914 | 37409.6 |
| hypothetical protein | N824_11150 | Not Available | + | 6166911 - 6168089 | 44114.7 |
| hypothetical protein | N824_11155 | Not Available | + | 6168127 - 6168579 | 16692.8 |
| peptidase m16 | N824_11160 | Not Available | + | 6168616 - 6169845 | 45816.6 |
| peptide deformylase | N824_11165 | Not Available | + | 6169864 - 6170430 | 21532.0 |
| hypothetical protein | N824_11170 | Not Available | - | 6170427 - 6171068 | 24004.9 |
| nitrogen-fixing protein nifu | N824_11175 | Not Available | - | 6171123 - 6171368 | 8719.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.