Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| multidrug abc transporter substrate-binding protein | N824_13865 | Not Available | + | 626671 - 627891 | 43541.7 |
| hypothetical protein | N824_13870 | Not Available | - | 628043 - 628240 | 7575.28 |
| hypothetical protein | N824_13875 | Not Available | - | 628378 - 629361 | 37600.3 |
| 1-deoxy-d-xylulose-5-phosphate synthase | N824_13880 | Not Available | - | 629361 - 631289 | 70442.8 |
| serine hydroxymethyltransferase | N824_13885 | Not Available | + | 631383 - 632654 | 46233.1 |
| hypothetical protein | N824_13890 | Not Available | + | 632674 - 635013 | 86917.9 |
| hypothetical protein | N824_13895 | Not Available | - | 635005 - 635130 | 4374.43 |
| hypothetical protein | N824_13900 | Not Available | + | 635195 - 635443 | 9374.41 |
| hypothetical protein | N824_13905 | Not Available | - | 635701 - 636702 | 36753.6 |
| hypothetical protein | N824_13910 | Not Available | + | 636820 - 637038 | 8030.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.