Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit gamma/tau | N824_11030 | Not Available | - | 6147080 - 6148228 | 43555.2 |
| holliday junction resolvase | N824_11035 | Not Available | + | 6148311 - 6148727 | 15899.2 |
| o-methyltransferase | N824_11040 | Not Available | + | 6148748 - 6149383 | 24127.1 |
| hypothetical protein | N824_11045 | Not Available | + | 6149387 - 6150067 | 25255.0 |
| hypothetical protein | N824_11050 | Not Available | + | 6150067 - 6150909 | 31350.2 |
| hypothetical protein | N824_11055 | Not Available | + | 6151025 - 6151777 | 28567.4 |
| hypothetical protein | N824_11060 | Not Available | + | 6151795 - 6152109 | 11629.5 |
| hypothetical protein | N824_11065 | Not Available | + | 6152182 - 6153180 | 37957.4 |
| signal recognition particle | N824_11070 | Not Available | + | 6153276 - 6154616 | 49093.1 |
| hypothetical protein | N824_11075 | Not Available | + | 6154698 - 6154979 | 10039.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.