Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_10980 | Not Available | - | 6131486 - 6134671 | 115117.0 |
| hypothetical protein | N824_10985 | Not Available | - | 6135120 - 6135605 | 17710.6 |
| hypothetical protein | N824_10990 | Not Available | - | 6135602 - 6135694 | 3473.27 |
| hypothetical protein | N824_10995 | Not Available | - | 6135695 - 6136267 | 19923.6 |
| hypothetical protein | N824_11000 | Not Available | - | 6136297 - 6137808 | 55392.0 |
| hypothetical protein | N824_11005 | Not Available | - | 6137819 - 6140998 | 114525.0 |
| hypothetical protein | N824_11010 | Not Available | - | 6141298 - 6143796 | 93409.9 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | N824_11015 | Not Available | + | 6143855 - 6145156 | 47599.1 |
| hypothetical protein | N824_11020 | Not Available | - | 6145148 - 6145618 | 17869.3 |
| hypothetical protein | N824_11025 | Not Available | - | 6145611 - 6146987 | 51951.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.