Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_10725 | Not Available | - | 6059334 - 6060500 | 44368.9 |
| hypothetical protein | N824_10730 | Not Available | - | 6060497 - 6061744 | 46290.7 |
| hypothetical protein | N824_10735 | Not Available | - | 6061766 - 6062434 | 24354.8 |
| hypothetical protein | N824_10740 | Not Available | - | 6062510 - 6063961 | 54697.7 |
| hypothetical protein | N824_10745 | Not Available | - | 6063981 - 6065234 | 46447.1 |
| hypothetical protein | N824_10750 | Not Available | + | 6065577 - 6066275 | 26310.6 |
| hypothetical protein | N824_10755 | Not Available | - | 6066694 - 6067248 | 21544.0 |
| hypothetical protein | N824_10760 | Not Available | + | 6067599 - 6068747 | 43086.4 |
| hypothetical protein | N824_10765 | Not Available | + | 6068952 - 6072248 | 120964.0 |
| hypothetical protein | N824_10770 | Not Available | + | 6072259 - 6073755 | 55266.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.