Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_10420 | Not Available | + | 5986774 - 5987004 | 8773.74 |
| hypothetical protein | N824_10425 | Not Available | + | 5987310 - 5988041 | 28002.6 |
| hypothetical protein | N824_10430 | Not Available | + | 5988022 - 5988588 | 21348.9 |
| hypothetical protein | N824_10435 | Not Available | + | 5988585 - 5990117 | 54793.7 |
| hypothetical protein | N824_10440 | Not Available | + | 5990114 - 5990482 | 14235.1 |
| histone h1-like protein | N824_10445 | Not Available | - | 5990594 - 5990773 | 6622.99 |
| hypothetical protein | N824_10450 | Not Available | - | 5990889 - 5991122 | 8626.34 |
| hypothetical protein | N824_10455 | Not Available | + | 5991347 - 5991460 | 4220.98 |
| hypothetical protein | N824_10460 | Not Available | - | 5991987 - 5993489 | 55103.9 |
| hypothetical protein | N824_10465 | Not Available | + | 5994450 - 5995757 | 48051.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.