Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_10320 | Not Available | - | 5974444 - 5974662 | 8464.3 |
| hypothetical protein | N824_10325 | Not Available | - | 5974673 - 5975449 | 29521.3 |
| hypothetical protein | N824_10330 | Not Available | - | 5975504 - 5975701 | 7371.29 |
| hypothetical protein | N824_10335 | Not Available | + | 5975724 - 5975855 | 4587.63 |
| hypothetical protein | N824_10340 | Not Available | - | 5975953 - 5976354 | 14516.9 |
| hypothetical protein | N824_10345 | Not Available | - | 5976351 - 5976590 | 9314.17 |
| hypothetical protein | N824_10350 | Not Available | - | 5976679 - 5976903 | 8714.05 |
| hypothetical protein | N824_10355 | Not Available | + | 5977015 - 5977182 | 6619.68 |
| hypothetical protein | N824_10360 | Not Available | + | 5977316 - 5977894 | 22506.0 |
| hypothetical protein | N824_10365 | Not Available | + | 5977906 - 5978529 | 24269.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.