Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_10270 | Not Available | - | 5968770 - 5968907 | 5346.49 |
| hypothetical protein | N824_10275 | Not Available | + | 5969244 - 5970356 | 42144.0 |
| hypothetical protein | N824_10280 | Not Available | - | 5971106 - 5971450 | 13084.9 |
| hypothetical protein | N824_10285 | Not Available | - | 5971417 - 5971605 | 7181.99 |
| hypothetical protein | N824_10290 | Not Available | + | 5971652 - 5971885 | 8934.15 |
| hypothetical protein | N824_10295 | Not Available | - | 5972066 - 5972446 | 13334.8 |
| hypothetical protein | N824_10300 | Not Available | - | 5972765 - 5972893 | 4780.84 |
| hypothetical protein | N824_10305 | Not Available | - | 5972897 - 5973664 | 29585.8 |
| hypothetical protein | N824_10310 | Not Available | - | 5973857 - 5974078 | 8461.82 |
| hypothetical protein | N824_10315 | Not Available | - | 5974080 - 5974385 | 11578.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.