Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_10220 | Not Available | + | 5955705 - 5956790 | 40664.0 |
| peptidase m28 | N824_10225 | Not Available | + | 5956796 - 5958109 | 48341.4 |
| hypothetical protein | N824_10230 | Not Available | - | 5958112 - 5958609 | 19048.0 |
| thiamine pyrophosphokinase | N824_10235 | Not Available | - | 5958628 - 5959188 | 21169.1 |
| hypothetical protein | N824_10240 | Not Available | - | 5959229 - 5960134 | 32911.9 |
| hypothetical protein | N824_10245 | Not Available | - | 5960142 - 5963540 | 126708.0 |
| hypothetical protein | N824_10250 | Not Available | + | 5963732 - 5964958 | 44219.8 |
| hypothetical protein | N824_10255 | Not Available | - | 5965004 - 5965339 | 13104.8 |
| hypothetical protein | N824_10260 | Not Available | + | 5965488 - 5966933 | 54897.9 |
| hypothetical protein | N824_10265 | Not Available | + | 5967030 - 5968526 | 57729.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.