Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_10120 | Not Available | + | 5935589 - 5936230 | 23985.9 |
| hypothetical protein | N824_10125 | Not Available | + | 5936248 - 5937495 | 46777.3 |
| biopolymer transporter tonb | N824_10130 | Not Available | + | 5937584 - 5939968 | 89549.8 |
| hypothetical protein | N824_10135 | Not Available | + | 5939997 - 5941199 | 44582.9 |
| hypothetical protein | N824_10140 | Not Available | + | 5941224 - 5942351 | 43491.8 |
| hypothetical protein | N824_10145 | Not Available | + | 5942377 - 5944848 | 91936.5 |
| hypothetical protein | N824_10150 | Not Available | - | 5944832 - 5945182 | 12911.3 |
| hypothetical protein | N824_10155 | Not Available | + | 5945297 - 5945503 | 7223.85 |
| metallo-beta-lactamase | N824_10160 | Not Available | + | 5945514 - 5946911 | 52250.7 |
| methyltransferase | N824_10165 | Not Available | + | 5946939 - 5947628 | 25956.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.